STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF05642.1Hypothetical protein. (323 aa)    
Predicted Functional Partners:
AKF05643.1
Phosphate-selective porin O and P.
       0.809
AKF05640.1
Biopolymer transport protein ExbD/TolR.
       0.704
AKF05641.1
MotA/TolQ/ExbB proton channel family protein.
     
 0.701
AKF05639.1
Hypothetical protein.
     
 0.614
AKF05644.1
Hypothetical protein.
       0.572
AKF07658.1
PAN domain protein.
  
  
 0.491
AKF10696.1
Hypothetical protein.
  
  
 0.491
AKF05637.1
Hypothetical protein.
       0.429
AKF05638.1
TonB family protein / TonB-dependent receptor.
     
 0.425
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.