STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF05687.1Hypothetical protein. (278 aa)    
Predicted Functional Partners:
AKF08073.1
Aminopeptidase.
  
     0.674
AKF03574.1
Hypothetical protein.
  
     0.555
AKF06486.1
Hypothetical protein.
  
     0.554
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
   
 
 0.519
AKF08192.1
Six-hairpin glycosidase-like protein.
 
     0.490
AKF05285.1
HEAT repeat protein.
  
     0.474
AKF05688.1
Peptidyl-tRNA hydrolase, archaeal type.
       0.474
AKF06337.1
Geranylgeranyl reductase.
  
     0.471
AKF09554.1
Hypothetical protein.
  
     0.459
AKF09001.1
Outer membrane protein OmpA family.
  
 
   0.456
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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