STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF05744.1O-GlcNAc transferase. (991 aa)    
Predicted Functional Partners:
AKF05613.1
TPR repeat protein.
 
 
   0.786
AKF07122.1
TPR domain protein, putative component of TonB system.
  
     0.754
AKF09169.1
TPR repeat protein.
  
     0.746
AKF09237.1
TPR domain/radical SAM/B12 binding domain protein.
  
     0.736
AKF05743.1
Hypothetical protein.
       0.671
AKF08575.1
TPR domain protein, putative component of TonB system.
  
     0.580
AKF10536.1
Hypothetical protein.
 
   0.566
AKF06466.1
TolA protein.
 
     0.557
AKF08116.1
HEAT repeat protein.
  
 
   0.554
AKF07782.1
Hypothetical protein.
  
     0.540
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.