STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
AKF05843.1Putative monothiol glutaredoxin ycf64-like protein; Belongs to the glutaredoxin family. Monothiol subfamily. (108 aa)    
Predicted Functional Partners:
AKF05842.1
Cell division protein BolA; Belongs to the BolA/IbaG family.
 
 
 0.983
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
  
     0.732
AKF07560.1
Iron binding protein IscA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family.
 
 0.664
AKF05844.1
Biotin synthase related domain containing protein.
       0.642
AKF05845.1
Uracil-DNA glycosylase, putative family 6.
       0.642
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
  
   
 0.626
AKF06033.1
Putative iron binding protein from the HesB_IscA_SufA family; Belongs to the HesB/IscA family.
 
 0.572
AKF05846.1
Adenylate cyclase.
       0.553
map
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
 
  
 0.537
AKF05841.1
Inner membrane protein YihY, formerly thought to be RNase BN.
       0.508
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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