STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF06118.1Two-component response regulator. (232 aa)    
Predicted Functional Partners:
AKF06117.1
Two-component sensor histidine kinase.
 
 0.934
AKF03043.1
Phosphate regulon sensor protein PhoR.
 
 0.836
AKF04896.1
Phosphate regulon sensor protein PhoR.
 
 0.834
AKF07466.1
Phosphate regulon sensor protein PhoR.
 
 0.834
AKF07485.1
Periplasmic sensor signal transduction histidine kinase.
 
 
 0.831
AKF11752.1
Periplasmic sensor signal transduction histidine kinase.
   0.810
AKF08626.1
Two-component hybrid sensor and regulator.
 
 
 0.808
AKF08497.1
Histidine kinase.
 
 
 0.796
AKF10177.1
Chemotaxis protein methyltransferase CheR.
 
 
 0.795
AKF08643.1
Phytochrome, two-component sensor histidine kinase.
 
   0.794
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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