STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF06161.1TPR domain protein. (980 aa)    
Predicted Functional Partners:
AKF06165.1
Hypothetical protein.
 
     0.845
AKF05787.1
Hypothetical protein.
  
     0.773
AKF06259.1
Hypothetical protein.
  
     0.773
AKF08346.1
Hypothetical protein.
  
     0.773
AKF09195.1
Hypothetical protein.
  
     0.769
AKF07769.1
Gliding motility protein MglA.
  
     0.764
AKF09042.1
General secretion pathway protein E.
  
     0.763
AKF07036.1
Hypothetical protein.
  
     0.748
AKF06832.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
     0.741
AKF05535.1
Hypothetical protein.
  
     0.712
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.