STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF06725.1DNA-binding response regulator, LuxR family. (1112 aa)    
Predicted Functional Partners:
AKF08626.1
Two-component hybrid sensor and regulator.
 
 
 0.846
AKF10740.1
Two-component hybrid sensor and regulator.
 
 
 0.838
AKF10177.1
Chemotaxis protein methyltransferase CheR.
 
 
 0.830
AKF03043.1
Phosphate regulon sensor protein PhoR.
  
   0.815
AKF06945.1
Two-component hybrid sensor and regulator.
  
   0.815
AKF07335.1
Adenylate cyclase.
 
   0.810
AKF10962.1
Two-component sensor histidine kinase.
 
 
 0.808
AKF06015.1
Phosphate regulon sensor protein PhoR.
  
   0.807
AKF04449.1
Sensor histidine kinase.
  
   0.795
AKF03830.1
Sensor histidine kinase.
  
   0.793
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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