STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF06747.1Phage tail assembly-like protein. (242 aa)    
Predicted Functional Partners:
AKF06749.1
Hypothetical protein.
 
     0.796
AKF06746.1
Hypothetical protein.
 
     0.734
AKF04787.1
Hypothetical protein.
 
   
 0.725
AKF06748.1
Hypothetical protein.
 
     0.690
AKF11166.1
N-formylglutamate deformylase.
 
   
 0.658
AKF06750.1
Retron-type RNA-directed DNA polymerase.
 
     0.655
AKF11117.1
Hypothetical protein.
 
     0.647
kptA
RNA NAD 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
 
   
 0.630
AKF09216.1
Hypothetical protein.
  
     0.610
AKF04293.1
tRNAHis-5'-guanylyltransferase.
  
     0.595
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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