STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF06752.1Hypothetical protein. (524 aa)    
Predicted Functional Partners:
AKF06464.1
Integral membrane protein.
 
   
 0.732
AKF10327.1
UbiA prenyltransferase; Belongs to the UbiA prenyltransferase family.
 
    0.698
AKF06753.1
Methyltransferase type 11.
       0.639
AKF10402.1
Nuclease.
   
  
 0.481
AKF10405.1
SNase domain protein.
   
  
 0.481
AKF07084.1
Capsular polysaccharide synthesis enzyme CpsA, sugar transferase.
     
 0.475
AKF07007.1
Tyrosine-protein kinase EpsD.
     
 0.472
AKF02876.1
Hypothetical protein.
  
    0.428
AKF06340.1
Outer membrane protein, OmpA/MotB family.
  
     0.428
AKF06000.1
UDP-glucose 4-epimerase.
 
  
 0.420
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.