STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF06774.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
AKF10247.1
Hypothetical protein.
  
     0.712
AKF04186.1
Serine/threonine-protein kinase transcriptional regulatory protein.
  
     0.479
AKF06772.1
Hypothetical protein.
       0.475
AKF06773.1
Tryptophan synthase alpha chain.
       0.475
AKF11024.1
Transcriptional regulator, MerR family protein.
  
 
   0.473
AKF04397.1
Hypothetical protein.
  
     0.468
AKF04465.1
Hypothetical protein.
  
     0.454
AKF04234.1
Hypothetical protein.
  
     0.447
AKF09391.1
Hypothetical protein.
  
     0.447
AKF07908.1
Hemoglobin-like protein HbO.
 
     0.409
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.