STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF07027.13-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)    
Predicted Functional Partners:
AKF04799.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.997
AKF08706.1
Enoyl-CoA hydratase.
 
 0.997
AKF09556.1
Hydroxymethylglutaryl-CoA synthase.
  
 0.983
AKF07023.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.971
AKF05064.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.969
AKF05756.1
Hypothetical protein.
  
 0.959
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.937
AKF10377.1
Acyl-coenzyme A oxidase 1, peroxisomal.
  
 0.936
AKF07188.1
Succinyl-CoA 3-ketoacid-coenzyme A transferase subunit B.
 
 
 0.931
AKF04621.1
Citrate synthase (si); Belongs to the citrate synthase family.
  
 0.925
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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