STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF07146.1UDP-glucose 4-epimerase. (356 aa)    
Predicted Functional Partners:
AKF03219.1
UDP-glucose 4-epimerase.
 
  
 0.777
AKF07147.1
Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
       0.773
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
       0.773
AKF07149.1
Anthranilate synthase, amidotransferase component.
       0.773
AKF06990.1
UDP-glucose 4-epimerase.
 
  
 0.757
AKF07151.1
Alpha/beta hydrolase.
   
   0.743
AKF07150.1
Hypothetical protein.
       0.737
AKF07924.1
UDP-glucose 4-epimerase.
  
     0.734
AKF09432.1
UDP-glucose 4-epimerase.
  
     0.731
AKF07226.1
Dihydroflavonol-4-reductase.
  
     0.640
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.