STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF07167.1Thioredoxin reductase. (329 aa)    
Predicted Functional Partners:
AKF03973.1
Thioredoxin reductase.
    
 0.886
AKF04723.1
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.692
AKF05456.1
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.692
AKF05369.1
Alkyl hydroperoxide reductase protein C.
  
 
 0.689
AKF05406.1
Alkyl hydroperoxide reductase subunit C-like protein.
  
 
 0.689
AKF04401.1
Catalase; Belongs to the catalase family.
   
 
 0.650
AKF07166.1
Hypothetical protein.
     
 0.536
AKF06538.1
Alkyl hydroperoxide reductase subunit C-like protein.
  
 
 0.527
AKF09446.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.521
AKF06625.1
Sulfur carrier protein adenylyltransferase ThiF.
  
  
 0.500
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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