STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF07918.1Anti-sigma B factor RsbT. (149 aa)    
Predicted Functional Partners:
AKF07915.1
RsbR, positive regulator of sigma-B.
 
 
 0.980
AKF07917.1
RsbS, negative regulator of sigma-B.
 
 
 0.980
AKF07916.1
Anti-sigma B factor RsbT.
 
     0.946
AKF02874.1
Phosphoserine phosphatase RsbX.
 
 
 0.923
AKF09912.1
Phosphoserine phosphatase RsbX.
 
 
 0.923
AKF02878.1
PAS sensor protein.
 
 
 0.921
AKF05926.1
RsbR, positive regulator of sigma-B.
 
 
 0.915
AKF09911.1
RsbS, negative regulator of sigma-B.
 
 
 0.915
AKF09914.1
RsbR, positive regulator of sigma-B.
 
 
 0.915
AKF11603.1
RsbR, positive regulator of sigma-B.
 
 
 0.915
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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