STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF08047.13-oxoacyl-[acyl-carrier protein] reductase. (297 aa)    
Predicted Functional Partners:
AKF05204.1
Omega-3 polyunsaturated fatty acid synthase subunit, PfaB; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.890
AKF08046.1
Transcriptional regulator, AraC family protein.
 
     0.785
AKF08045.1
Serine/threonine protein kinase.
       0.727
AKF05931.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
     0.569
AKF06652.1
Dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.508
AKF03572.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
   0.506
AKF06034.1
FolM Alternative dihydrofolate reductase 1.
  
     0.472
AKF05820.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
     0.471
AKF03071.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
     0.457
AKF07185.1
Non-ribosomal peptide synthase.
  
 
 0.436
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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