STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF08144.1Hypothetical protein. (282 aa)    
Predicted Functional Partners:
AKF07046.1
Metallo-beta-lactamase family protein.
 
     0.967
AKF06156.1
TesB-like acyl-CoA thioesterase 3.
  
     0.556
AKF08143.1
Hypothetical protein.
  
    0.539
AKF09578.1
Arsenical pump-driving ATPase.
  
   
 0.521
AKF09527.1
Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor.
 
   0.510
AKF07752.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.507
AKF09773.1
Oxidoreductase, short chain dehydrogenase/reductase family.
 
 
 0.456
AKF08370.1
Dehydrogenase.
  
 
   0.455
AKF09772.1
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
    0.433
AKF05332.1
Arsenical pump-driving ATPase.
  
   
 0.415
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.