STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF08247.1Toluene tolerance precursor. (209 aa)    
Predicted Functional Partners:
AKF06375.1
Mce family protein.
  
 0.923
AKF07093.1
Hypothetical protein.
  
 0.923
AKF09798.1
Toluene tolerance.
  
  
 
0.914
AKF05623.1
Hypothetical protein.
  
 0.909
AKF04641.1
ABC-type transport protein.
  
 
 0.845
AKF05624.1
Methionine ABC transporter ATP-binding protein.
  
 
 0.845
AKF05810.1
ABC-type transport protein.
  
 
 0.845
AKF05811.1
ABC transporter, ATP-binding protein.
  
 
 0.845
AKF07094.1
Methionine ABC transporter ATP-binding protein.
  
 
 0.845
AKF07095.1
Hypothetical protein.
  
 
 0.845
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.