STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF08715.13-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (388 aa)    
Predicted Functional Partners:
AKF08706.1
Enoyl-CoA hydratase.
 
 0.998
AKF04799.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.997
AKF09556.1
Hydroxymethylglutaryl-CoA synthase.
  
 0.983
AKF10377.1
Acyl-coenzyme A oxidase 1, peroxisomal.
  
 0.936
AKF11405.1
Glutaryl-CoA dehydrogenase.
  
 0.936
AKF07756.1
Acetyl-coenzyme A carboxyl transferase alpha chain.
  
 0.928
AKF04415.1
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 
0.924
AKF06886.1
Hydroxymethylglutaryl-CoA lyase.
  
 
 0.923
AKF04798.1
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 
0.916
AKF07027.1
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 
0.916
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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