STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF09116.1Putative abductin-like protein. (520 aa)    
Predicted Functional Partners:
AKF03333.1
Adventurous gliding motility protein S.
 
 
 0.863
AKF03328.1
Adventurous gliding motility protein S.
 
 
 0.862
AKF03329.1
Biopolymer transport protein.
 
 
 0.858
AKF03332.1
TolR-like protein.
 
 
 0.852
AKF09127.1
TPR domain protein, putative component of TonB system.
 
     0.780
AKF06441.1
TPR domain protein, putative component of TonB system.
 
     0.775
AKF07060.1
TPR domain protein, putative component of TonB system.
 
     0.761
AKF03330.1
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.752
AKF09117.1
Hypothetical protein.
       0.718
AKF03920.1
General secretion pathway protein J.
  
     0.714
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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