STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF09133.1Sterol desaturase. (270 aa)    
Predicted Functional Partners:
AKF09140.1
Squalene synthase.
  
 
 0.898
AKF09142.1
Squalene--hopene cyclase.
  
 
 0.898
AKF09135.1
Hypothetical protein.
       0.778
AKF09134.1
Molybdopterin-based tungsten cofactor biosynthesis protein.
       0.776
AKF09137.1
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.
       0.776
AKF09136.1
Hypothetical protein.
       0.773
AKF09139.1
Cytochrome P450 51.
  
 
 0.713
AKF09145.1
Hydroxymethylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family.
  
 
 0.672
AKF09138.1
Hypothetical protein.
       0.631
AKF09141.1
Delta(24(24(1)))-sterol reductase.
       0.525
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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