STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF09229.1SAM-dependent methyltransferase. (273 aa)    
Predicted Functional Partners:
AKF10808.1
Gamma-tocopherol methyltransferase.
 
   
 0.659
AKF09590.1
Putative methyltransferase.
  
     0.606
AKF03942.1
SAM-dependent methyltransferase.
 
   
 0.593
AKF06870.1
Methyltransferase type 11.
  
     0.576
AKF09228.1
Hypothetical protein.
       0.572
AKF04307.1
Methyltransferase type 11.
  
     0.519
AKF09847.1
Methyltransferase.
  
     0.413
AKF05237.1
Methyltransferase type 11.
  
     0.407
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.