STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF09350.1Hydrolase, haloacid dehalogenase-like family. (227 aa)    
Predicted Functional Partners:
AKF09501.1
Glycolate dehydrogenase.
    
 0.905
AKF11401.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.904
AKF09820.1
Phosphoglycolate phosphatase.
     
  0.900
AKF09323.1
Signal transduction response regulator / Disease resistance domain-containing protein.
  
    0.671
AKF09351.1
Potassium efflux system KefA protein / Small-conductance mechanosensitive channel.
  
    0.574
moaA
Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
    0.544
AKF09349.1
16S rRNA processing protein RimM.
       0.481
AKF09075.1
Signal transduction response regulator / Disease resistance domain-containing protein.
  
    0.471
AKF05077.1
Hypothetical protein.
  
     0.445
AKF08991.1
Signal transduction response regulator / Disease resistance domain-containing protein.
  
    0.423
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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