STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF09458.1Response regulator of zinc sigma-54-dependent two-component system. (481 aa)    
Predicted Functional Partners:
AKF06495.1
Sensor histidine kinase.
 
 
 0.720
AKF09459.1
Integrin-like protein.
       0.697
AKF09460.1
TonB-dependent receptor.
       0.697
AKF07544.1
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.665
AKF06382.1
Flagellar sensor histidine kinase FleS.
 
   0.597
AKF08493.1
Flagellar sensor histidine kinase FleS.
 
 
   0.591
AKF06383.1
Flagellar sensor histidine kinase FleS.
 
   0.560
AKF03022.1
Flagellar sensor histidine kinase FleS.
  
 
   0.535
AKF09012.1
Flagellar sensor histidine kinase FleS.
 
 
   0.513
AKF11351.1
Nitrogen regulation protein NtrY.
 
 
 0.505
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.