STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF09492.1FAD-dependent oxidoreductase. (1025 aa)    
Predicted Functional Partners:
AKF04802.1
FAD-dependent oxidoreductase.
  
     0.773
AKF07229.1
L-gulono-1,4-lactone oxidase.
 
    0.718
AKF09142.1
Squalene--hopene cyclase.
  
  
 0.583
AKF09493.1
Hypothetical protein.
       0.518
AKF09139.1
Cytochrome P450 51.
  
 
 0.479
AKF05562.1
Electron transfer flavoprotein, alpha subunit.
  
 
 0.441
AKF05561.1
Electron transfer flavoprotein, beta subunit.
  
 
 0.438
AKF08959.1
Glutamate synthase [NADPH] large chain.
     
 0.422
AKF09140.1
Squalene synthase.
 
  
 0.417
AKF07388.1
Sterol desaturase family protein.
  
  
 0.412
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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