STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF09644.1Oxidoreductase, aldo/keto reductase family. (296 aa)    
Predicted Functional Partners:
AKF09643.1
Alpha-glucosidase.
     
 0.782
AKF04420.1
Alpha,alpha-trehalose-phosphate synthase.
   
  
 0.662
AKF06555.1
Alpha,alpha-trehalose-phosphate synthase.
   
  
 0.662
AKF08771.1
Alpha,alpha-trehalose-phosphate synthase.
   
  
 0.662
AKF09642.1
Lipid A export ATP-binding/permease protein MsbA.
   
 
 0.571
AKF09645.1
Hypothetical protein.
       0.551
AKF07213.1
5,10-methylenetetrahydrofolate reductase.
   
 0.502
AKF03813.1
Serine protein kinase (prkA protein), P-loop containing.
   
    0.501
AKF06617.1
Serine protein kinase (prkA protein), P-loop containing.
   
    0.501
AKF05043.1
Quinone oxidoreductase.
   
 
 0.493
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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