AKF09655.1 protein (Sandaracinus amylolyticus)

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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protein homology

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[Homology]

Score

AKF09655.1

Capsular polysaccharide ABC transporter, ATP-binding protein KpsT. (231 aa)

Predicted Functional Partners:

AKF09654.1

0.999

AKF09656.1

0.998

AKF09661.1

0.984

AKF09657.1

0.933

AKF09652.1

0.833

AKF09653.1

0.773

AKF07009.1

0.706

AKF07159.1

0.702

AKF06665.1

0.690

AKF09667.1

0.630

Your Current Organism:

Sandaracinus amylolyticus

NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKF06665.1	AKF09655.1	DB32_003814	DB32_006804	Phosphoribosyltransferase domain protein.	Capsular polysaccharide ABC transporter, ATP-binding protein KpsT.	0.690
AKF07009.1	AKF07159.1	DB32_004158	DB32_004308	Capsular polysaccharide synthesis enzyme CpsC, polysaccharide export.	Capsule polysaccharide export protein.	0.633
AKF07009.1	AKF09654.1	DB32_004158	DB32_006803	Capsular polysaccharide synthesis enzyme CpsC, polysaccharide export.	Hypothetical protein.	0.696
AKF07009.1	AKF09655.1	DB32_004158	DB32_006804	Capsular polysaccharide synthesis enzyme CpsC, polysaccharide export.	Capsular polysaccharide ABC transporter, ATP-binding protein KpsT.	0.706
AKF07009.1	AKF09656.1	DB32_004158	DB32_006805	Capsular polysaccharide synthesis enzyme CpsC, polysaccharide export.	Capsular polysaccharide export system inner membrane protein KpsE.	0.728
AKF07009.1	AKF09661.1	DB32_004158	DB32_006810	Capsular polysaccharide synthesis enzyme CpsC, polysaccharide export.	Capsular polysaccharide export system protein KpsS.	0.788
AKF07159.1	AKF07009.1	DB32_004308	DB32_004158	Capsule polysaccharide export protein.	Capsular polysaccharide synthesis enzyme CpsC, polysaccharide export.	0.633
AKF07159.1	AKF09654.1	DB32_004308	DB32_006803	Capsule polysaccharide export protein.	Hypothetical protein.	0.692
AKF07159.1	AKF09655.1	DB32_004308	DB32_006804	Capsule polysaccharide export protein.	Capsular polysaccharide ABC transporter, ATP-binding protein KpsT.	0.702
AKF07159.1	AKF09656.1	DB32_004308	DB32_006805	Capsule polysaccharide export protein.	Capsular polysaccharide export system inner membrane protein KpsE.	0.728
AKF07159.1	AKF09661.1	DB32_004308	DB32_006810	Capsule polysaccharide export protein.	Capsular polysaccharide export system protein KpsS.	0.788
AKF09652.1	AKF09653.1	DB32_006801	DB32_006802	Arabinose 5-phosphate isomerase.	Hypothetical protein.	0.773
AKF09652.1	AKF09654.1	DB32_006801	DB32_006803	Arabinose 5-phosphate isomerase.	Hypothetical protein.	0.812
AKF09652.1	AKF09655.1	DB32_006801	DB32_006804	Arabinose 5-phosphate isomerase.	Capsular polysaccharide ABC transporter, ATP-binding protein KpsT.	0.833
AKF09652.1	AKF09656.1	DB32_006801	DB32_006805	Arabinose 5-phosphate isomerase.	Capsular polysaccharide export system inner membrane protein KpsE.	0.831
AKF09652.1	AKF09657.1	DB32_006801	DB32_006806	Arabinose 5-phosphate isomerase.	Capsular polysaccharide export system periplasmic protein KpsD.	0.525
AKF09652.1	AKF09661.1	DB32_006801	DB32_006810	Arabinose 5-phosphate isomerase.	Capsular polysaccharide export system protein KpsS.	0.774
AKF09653.1	AKF09652.1	DB32_006802	DB32_006801	Hypothetical protein.	Arabinose 5-phosphate isomerase.	0.773
AKF09653.1	AKF09654.1	DB32_006802	DB32_006803	Hypothetical protein.	Hypothetical protein.	0.773
AKF09653.1	AKF09655.1	DB32_006802	DB32_006804	Hypothetical protein.	Capsular polysaccharide ABC transporter, ATP-binding protein KpsT.	0.773

page 1 of 4

Network Stats

number of nodes:

11

number of edges:

33

average node degree:

6

avg. local clustering coefficient:

0.807

expected number of edges:

16

PPI enrichment p-value:

8.8e-05

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006099

Tricarboxylic acid cycle

4 of 16

1.94

1.78

0.00024

GO:0006091

Generation of precursor metabolites and energy

5 of 142

1.08

0.76

0.0070

GO:0019752

Carboxylic acid metabolic process

7 of 394

0.79

0.56

0.0070

GO:0044281

Small molecule metabolic process

9 of 643

0.68

0.53

0.0022

GO:0044237

Cellular metabolic process

11 of 1569

0.38

0.3

0.0084

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0051538

3 iron, 4 sulfur cluster binding

2 of 3

2.36

1.01

0.0140

GO:0051536

Iron-sulfur cluster binding

5 of 99

1.24

0.92

0.0042

GO:0016842

Amidine-lyase activity

2 of 7

1.99

0.74

0.0402

GO:0016491

Oxidoreductase activity

8 of 488

0.75

0.56

0.0042

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005829

Cytosol

6 of 393

0.72

0.41

0.0431

GO:0005737

Cytoplasm

10 of 1372

0.4

0.27

0.0431

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:1047

Nitrogen metabolism

3 of 5

2.32

1.76

0.00047

CL:1013

Glutamine family amino acid biosynthetic process

4 of 22

1.8

1.58

0.00047

CL:1899

Mixed, incl. Citrate cycle (TCA cycle), and FAD-linked oxidase-like, C-terminal

5 of 65

1.42

1.32

0.00047

CL:1904

Citrate cycle (TCA cycle), and Malic enzyme, NAD-binding

3 of 31

1.52

1.01

0.0063

CL:1007

Cellular amino acid biosynthetic process, and Nucleoside monophosphate metabolic process

5 of 114

1.18

1.0

0.0012

(more ...)

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00250

Alanine, aspartate and glutamate metabolism

5 of 27

1.81

2.48

1.79e-06

map00020

Citrate cycle (TCA cycle)

4 of 28

1.69

1.79

8.62e-05

map00910

Nitrogen metabolism

3 of 17

1.78

1.52

0.00066

map01230

Biosynthesis of amino acids

5 of 143

1.08

0.95

0.00072

map01200

Carbon metabolism

4 of 133

1.02

0.71

0.0072

(more ...)

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0816

Tricarboxylic acid cycle

3 of 10

2.01

1.51

0.0011

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF00206

Lyase

2 of 3

2.36

0.74

0.0436

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