STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF09780.1Transcriptional regulator, LuxR family protein. (288 aa)    
Predicted Functional Partners:
AKF11109.1
Hypothetical protein.
  
     0.710
AKF08349.1
Hypothetical protein.
  
     0.692
AKF08174.1
Hypothetical protein.
  
     0.548
AKF09781.1
Ubiquinone biosynthesis monooxygenase UbiB.
       0.511
AKF08350.1
Hypothetical protein.
  
     0.437
AKF09782.1
Serine/threonine protein kinase.
       0.430
AKF08943.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.