STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF10098.1Sensor histidine kinase PrrB (RegB). (409 aa)    
Predicted Functional Partners:
AKF10097.1
Dna binding response regulator PrrA.
 0.998
AKF03495.1
Hypothetical protein.
 
 
 0.859
AKF04510.1
Chemotaxis protein methyltransferase CheR.
  
 
   0.598
AKF03653.1
Chemotaxis protein methyltransferase CheR.
 
 
 0.586
AKF05181.1
Sensory box histidine kinase.
 
 
 0.585
AKF10186.1
Two-component sensor PilS.
  
 
 0.564
AKF06503.1
Sensor histidine kinase.
  
   0.561
AKF05241.1
Signal transduction histidine kinase, nitrogen specific, NtrB.
 
 
 
 0.549
AKF06255.1
Phosphate regulon transcriptional regulatory protein PhoB.
 
   0.542
AKF08626.1
Two-component hybrid sensor and regulator.
 
 
 
 0.539
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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