STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF10116.1Short-chain dehydrogenase, associated with 2-hydroxychromene-2-carboxylate isomerase family protein. (257 aa)    
Predicted Functional Partners:
AKF10115.1
GNAT family acetyltransferase.
 
     0.619
AKF04872.1
Dehydrogenase.
 
     0.547
AKF05820.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
     0.543
AKF03071.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
     0.524
AKF09462.1
3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.524
AKF06034.1
FolM Alternative dihydrofolate reductase 1.
 
     0.501
AKF05093.1
Oxidoreductase, short-chain dehydrogenase/reductase family.
 
     0.500
AKF06652.1
Dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.476
AKF05931.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
     0.458
AKF03623.1
Citronellol and citronellal dehydrogenase.
 
     0.430
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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