STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF10226.1Alkylated DNA repair protein AlkB. (210 aa)    
Predicted Functional Partners:
AKF10227.1
Hypothetical protein.
       0.773
AKF10224.1
S-adenosylmethionine synthetase; Belongs to the AdoMet synthase family.
       0.678
AKF10225.1
Lead, cadmium, zinc and mercury transporting ATPase.
       0.678
AKF10228.1
Hypothetical protein.
       0.542
AKF05025.1
ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase.
 
  
 0.539
AKF04708.1
Hypothetical protein.
   
    0.480
AKF07457.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
   
    0.480
AKF11550.1
Hypothetical protein.
   
    0.480
AKF07582.1
Short-chain dehydrogenase/reductase SDR.
 
      0.477
AKF05853.1
ADA regulatory protein.
  
  
 0.464
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.