STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF10613.1Glycosyltransferase. (374 aa)    
Predicted Functional Partners:
AKF03842.1
UDP-galactopyranose mutase.
  
 0.943
AKF09423.1
UDP-galactopyranose mutase.
  
 0.928
AKF03843.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
  
 0.814
AKF05696.1
Putative SigmaB asociated two-component system sensor protein.
  
   
 0.609
AKF03838.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
     0.607
AKF03602.1
Hypothetical protein.
  
    0.583
AKF10573.1
Hypothetical protein.
  
    0.554
AKF07084.1
Capsular polysaccharide synthesis enzyme CpsA, sugar transferase.
  
  
 0.522
AKF10611.1
Hypothetical protein.
  
     0.493
AKF10101.1
Chemotaxis protein methyltransferase CheR.
  
   
 0.490
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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