STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF10676.1Alkyldihydroxyacetonephosphate synthase. (560 aa)    
Predicted Functional Partners:
AKF03325.1
Alkyldihydroxyacetonephosphate synthase.
  
  
 
0.916
AKF10675.1
Hypothetical protein.
  
  
 0.739
AKF10677.1
Hypothetical protein.
       0.598
AKF10678.1
Hypothetical protein.
       0.598
AKF06334.1
Long-chain-fatty-acid--CoA ligase.
 
   
 0.536
ribA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.
       0.457
AKF03318.1
Anaerobic glycerol-3-phosphate dehydrogenase subunit A; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.447
AKF05562.1
Electron transfer flavoprotein, alpha subunit.
  
 
 0.441
AKF05561.1
Electron transfer flavoprotein, beta subunit.
  
 
 0.438
AKF08959.1
Glutamate synthase [NADPH] large chain.
     
 0.422
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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