STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF10795.1Putative trypsin. (391 aa)    
Predicted Functional Partners:
AKF11463.1
Hypothetical protein.
 
 
 0.806
AKF05183.1
Putative toxin subunit.
  
     0.774
AKF05184.1
Insecticidal toxin complex protein.
  
     0.774
AKF11494.1
Tryptophan synthase alpha chain.
  
     0.774
AKF05186.1
Tryptophan synthase alpha chain.
  
     0.765
AKF06253.1
PDZ domain protein.
  
     0.764
AKF10572.1
Hypothetical protein.
  
     0.751
AKF05991.1
Membrane protein in colicin uptake-like protein.
  
     0.748
AKF09094.1
Hypothetical protein.
  
     0.741
AKF09446.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 
 0.741
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.