STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF10939.1Hypothetical protein. (423 aa)    
Predicted Functional Partners:
AKF10934.1
Outer membrane lipoprotein-sorting protein.
 
     0.952
AKF10935.1
Putative ABC transporter integral membrane protein.
 
    0.931
AKF10936.1
ABC-type transport system, in lipoprotein release, permease component.
 
    0.875
AKF10937.1
Methionine ABC transporter ATP-binding protein.
 
     0.851
AKF10938.1
Transcriptional regulator, TetR family protein.
       0.777
AKF10940.1
Hypothetical protein.
       0.723
AKF10933.1
Hypothetical protein.
       0.536
AKF10941.1
Hypothetical protein.
       0.514
AKF09959.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.