STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF11114.1L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. (302 aa)    
Predicted Functional Partners:
AKF11173.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.967
AKF08055.1
NAD-dependent malic enzyme.
  
 0.939
AKF08168.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
  
 0.934
AKF03733.1
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit.
   
 0.918
AKF04766.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.918
AKF10584.1
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit.
   
 0.918
AKF04928.1
Aspartate aminotransferase.
  
 0.915
AKF05819.1
Hypothetical protein.
  
 0.915
AKF07969.1
Aspartate aminotransferase.
  
 0.915
AKF10688.1
Aspartate aminotransferase.
  
 0.915
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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