STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF11133.1Hypothetical protein. (458 aa)    
Predicted Functional Partners:
AKF03236.1
Radical SAM domain protein.
  
     0.768
AKF05349.1
Hypothetical protein.
  
     0.766
AKF11566.1
Hypothetical protein.
  
     0.760
AKF03555.1
Sterol desaturase family protein.
  
     0.757
AKF11298.1
N-glycosidase F, putative.
  
     0.743
AKF03469.1
Tryptophan synthase alpha chain.
  
     0.707
AKF11135.1
Hypothetical protein.
  
     0.677
AKF06766.1
Hypothetical protein.
  
     0.674
AKF05203.1
Tryptophan synthase alpha chain.
  
     0.672
AKF04300.1
Sterol desaturase family protein.
  
     0.670
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.