STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF11715.1Putative abductin-like protein. (1604 aa)    
Predicted Functional Partners:
AKF11716.1
Hypothetical protein.
 
    
0.817
AKF10899.1
Hypothetical protein.
 
     0.722
AKF07340.1
Fatty acid desaturase.
  
     0.691
AKF09344.1
Multiple EGF-like-domain protein 3 precursor.
  
     0.691
AKF09359.1
Microbial collagenase secreted protein.
  
     0.683
AKF09433.1
Tryptophan synthase alpha chain.
  
     0.674
AKF03206.1
Radical SAM domain heme biosynthesis protein.
 
     0.661
AKF06006.1
Tryptophan synthase alpha chain.
  
     0.659
AKF08997.1
Putative lipoprotein.
 
 
   0.654
AKF03212.1
Radical SAM domain protein.
 
     0.647
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.