STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
SFB75657.1Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (118 aa)    
Predicted Functional Partners:
SFC94223.1
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
 
      0.786
SFC61333.1
3-oxoacid CoA-transferase/3-oxoacid CoA-transferase subunit A.
  
 
 0.622
SFC76583.1
3-oxoacid CoA-transferase/3-oxoacid CoA-transferase subunit B.
  
 
 0.622
SFC83856.1
3-oxoacid CoA-transferase; Belongs to the 3-oxoacid CoA-transferase family.
  
 
 0.622
SFB75641.1
Pimeloyl-ACP methyl ester carboxylesterase.
    
  0.572
SFB76808.1
AraC-type DNA-binding protein.
    
 0.458
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
    
  0.445
SFC54930.1
C-terminal processing protease CtpA/Prc, contains a PDZ domain; Degrades oligopeptides; Belongs to the peptidase S41B family.
  
    0.410
SFC92251.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 
 0.407
Your Current Organism:
Flexibacter flexilis
NCBI taxonomy Id: 927664
Other names: F. flexilis DSM 6793, Flexibacter flexilis ATCC 23079, Flexibacter flexilis DSM 6793, Flexibacter flexilis IFO 15060, Flexibacter flexilis str. DSM 6793, Flexibacter flexilis strain DSM 6793
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