STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB77260.1TonB protein C-terminal. (605 aa)    
Predicted Functional Partners:
SFC60331.1
Outer membrane protein OmpA.
 
 
 
 0.930
SFC40014.1
WD40-like Beta Propeller Repeat.
 
 
 
 0.904
SFC96816.1
Outer membrane protein OmpA.
 
 
 
 0.874
SFC36772.1
WD40-like Beta Propeller Repeat.
   
 
 0.849
SFB94251.1
Biopolymer transport protein ExbD/TolR.
 
   0.831
SFB94225.1
Biopolymer transport protein ExbD.
  
   0.808
SFB84024.1
Biopolymer transport protein ExbD.
   
   0.796
SFB94275.1
Biopolymer transport protein ExbB.
  
 
 0.796
SFB84050.1
Biopolymer transport protein ExbB.
  
 
 0.783
SFB93726.1
Outer membrane protein transport protein (OMPP1/FadL/TodX).
  
     0.702
Your Current Organism:
Flexibacter flexilis
NCBI taxonomy Id: 927664
Other names: F. flexilis DSM 6793, Flexibacter flexilis ATCC 23079, Flexibacter flexilis DSM 6793, Flexibacter flexilis IFO 15060, Flexibacter flexilis str. DSM 6793, Flexibacter flexilis strain DSM 6793
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