STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB84595.1Putative NADPH-quinone reductase (modulator of drug activity B). (192 aa)    
Predicted Functional Partners:
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
  0.897
SFB84573.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 
     0.667
SFB75911.1
Putative NADPH-quinone reductase (modulator of drug activity B).
  
  
  0.643
SFB84549.1
NADH-quinone oxidoreductase subunit L.
       0.527
SFC29716.1
Vitamin K-dependent gamma-carboxylase.
    
  0.461
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
    
  0.454
SFB84522.1
Predicted metalloprotease, contains C-terminal PDZ domain.
       0.452
SFB77217.1
Aspartate aminotransferase.
   
    0.446
SFC05563.1
Methionine aminotransferase.
   
    0.446
SFC51144.1
Aspartate aminotransferase.
   
    0.446
Your Current Organism:
Flexibacter flexilis
NCBI taxonomy Id: 927664
Other names: F. flexilis DSM 6793, Flexibacter flexilis ATCC 23079, Flexibacter flexilis DSM 6793, Flexibacter flexilis IFO 15060, Flexibacter flexilis str. DSM 6793, Flexibacter flexilis strain DSM 6793
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