STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB98274.14-amino-4-deoxy-L-arabinose transferase. (499 aa)    
Predicted Functional Partners:
SFC55173.1
KDO2-lipid IV(A) lauroyltransferase.
 
  
 0.594
SFC01064.1
Dolichol-phosphate mannosyltransferase.
 
 
  0.568
lpxK
Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
  
  
  0.524
SFB93933.1
Hypothetical protein.
  
    0.511
SFB99757.1
Dolichol-phosphate mannosyltransferase.
 
 
  0.506
SFC26610.1
TonB-dependent Receptor Plug Domain.
  
     0.490
SFD01821.1
Glycosyltransferase, GT2 family.
  
     0.478
SFB98245.1
4-hydroxyphenylpyruvate dioxygenase.
       0.474
SFB81736.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
  0.457
SFC01484.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.421
Your Current Organism:
Flexibacter flexilis
NCBI taxonomy Id: 927664
Other names: F. flexilis DSM 6793, Flexibacter flexilis ATCC 23079, Flexibacter flexilis DSM 6793, Flexibacter flexilis IFO 15060, Flexibacter flexilis str. DSM 6793, Flexibacter flexilis strain DSM 6793
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