STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC03305.1Cysteine protease, C1A family. (541 aa)    
Predicted Functional Partners:
SFB95178.1
ATPase family associated with various cellular activities (AAA).
  
 
 0.926
SFC37203.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
 
 0.875
SFC61659.1
Citrate synthase; Belongs to the citrate synthase family.
    
   0.857
SFC29617.1
Hypothetical protein.
   
 
 0.851
SFC36899.1
Thioredoxin.
    
 0.635
SFC51263.1
AhpC/TSA family protein.
    
 0.635
rpsK
Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
   
  0.605
SFB72414.1
Leucine Rich repeat-containing protein.
  
 0.491
SFB74263.1
FKBP-type peptidyl-prolyl cis-trans isomerase.
    
 
 0.454
SFC61958.1
FKBP-type peptidyl-prolyl cis-trans isomerase.
    
 
 0.454
Your Current Organism:
Flexibacter flexilis
NCBI taxonomy Id: 927664
Other names: F. flexilis DSM 6793, Flexibacter flexilis ATCC 23079, Flexibacter flexilis DSM 6793, Flexibacter flexilis IFO 15060, Flexibacter flexilis str. DSM 6793, Flexibacter flexilis strain DSM 6793
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.