STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB94275.1Biopolymer transport protein ExbB. (271 aa)    
Predicted Functional Partners:
SFB94251.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.992
SFB94225.1
Biopolymer transport protein ExbD.
 
 
 0.990
SFB94201.1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.957
SFB84024.1
Biopolymer transport protein ExbD.
 
 
 0.946
SFC28360.1
TonB family C-terminal domain-containing protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 
 0.801
SFB77260.1
TonB protein C-terminal.
  
 
 0.796
SFC52683.1
Phosphate transport system substrate-binding protein.
 
    0.792
SFC15095.1
Hypothetical protein.
  
 
 0.783
SFC25652.1
Protein TonB, links inner and outer membranes.
  
 
 0.783
SFC52707.1
Tetratricopeptide repeat-containing protein.
 
     0.782
Your Current Organism:
Flexibacter flexilis
NCBI taxonomy Id: 927664
Other names: F. flexilis DSM 6793, Flexibacter flexilis ATCC 23079, Flexibacter flexilis DSM 6793, Flexibacter flexilis IFO 15060, Flexibacter flexilis str. DSM 6793, Flexibacter flexilis strain DSM 6793
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.