Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFC19134.1 | SFC19165.1 | SAMN05421780_103217 | SAMN05421780_103218 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | Motility quorum-sensing regulator, toxin of MqsA. | 0.414 |
SFC19134.1 | SFC19222.1 | SAMN05421780_103217 | SAMN05421780_103219 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | Putative zinc finger/helix-turn-helix protein, YgiT family. | 0.414 |
SFC19165.1 | SFC19134.1 | SAMN05421780_103218 | SAMN05421780_103217 | Motility quorum-sensing regulator, toxin of MqsA. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.414 |
SFC19165.1 | SFC19222.1 | SAMN05421780_103218 | SAMN05421780_103219 | Motility quorum-sensing regulator, toxin of MqsA. | Putative zinc finger/helix-turn-helix protein, YgiT family. | 0.795 |
SFC19165.1 | SFC19248.1 | SAMN05421780_103218 | SAMN05421780_103220 | Motility quorum-sensing regulator, toxin of MqsA. | Manganese/zinc/iron transport system permease protein. | 0.592 |
SFC19222.1 | SFC19134.1 | SAMN05421780_103219 | SAMN05421780_103217 | Putative zinc finger/helix-turn-helix protein, YgiT family. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.414 |
SFC19222.1 | SFC19165.1 | SAMN05421780_103219 | SAMN05421780_103218 | Putative zinc finger/helix-turn-helix protein, YgiT family. | Motility quorum-sensing regulator, toxin of MqsA. | 0.795 |
SFC19222.1 | SFC19248.1 | SAMN05421780_103219 | SAMN05421780_103220 | Putative zinc finger/helix-turn-helix protein, YgiT family. | Manganese/zinc/iron transport system permease protein. | 0.592 |
SFC19248.1 | SFC19165.1 | SAMN05421780_103220 | SAMN05421780_103218 | Manganese/zinc/iron transport system permease protein. | Motility quorum-sensing regulator, toxin of MqsA. | 0.592 |
SFC19248.1 | SFC19222.1 | SAMN05421780_103220 | SAMN05421780_103219 | Manganese/zinc/iron transport system permease protein. | Putative zinc finger/helix-turn-helix protein, YgiT family. | 0.592 |