STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC13691.1AraC-type DNA-binding protein. (306 aa)    
Predicted Functional Partners:
SFB70626.1
Hypothetical protein.
  
     0.763
SFC89487.1
Hypothetical protein.
  
     0.763
SFB98585.1
Hypothetical protein.
  
     0.754
SFB84006.1
Hypothetical protein.
  
     0.752
SFC12653.1
Hypothetical protein.
  
     0.748
SFC32825.1
Hypothetical protein.
  
     0.740
SFC74213.1
Hypothetical protein.
  
     0.733
SFC28523.1
Membrane protein required for colicin V production.
  
     0.726
SFC03024.1
Phosphoribosylanthranilate isomerase.
  
     0.716
SFB85208.1
Hypothetical protein.
  
     0.709
Your Current Organism:
Flexibacter flexilis
NCBI taxonomy Id: 927664
Other names: F. flexilis DSM 6793, Flexibacter flexilis ATCC 23079, Flexibacter flexilis DSM 6793, Flexibacter flexilis IFO 15060, Flexibacter flexilis str. DSM 6793, Flexibacter flexilis strain DSM 6793
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.