STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC14244.1Uncharacterized domain 1-containing protein. (148 aa)    
Predicted Functional Partners:
SFB93672.1
Uncharacterized domain 1-containing protein.
  
     0.731
SFC29787.1
Ferredoxin, 2Fe-2S.
 
 
  0.655
SFC14274.1
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
       0.623
SFC87555.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
  0.595
SFC63181.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
    
  0.574
SFC55437.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
 
 
 0.539
SFC14317.1
Phosphoesterase RecJ domain-containing protein.
  
    0.523
SFC14216.1
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.521
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
    
 0.503
menB
Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).
    
 0.503
Your Current Organism:
Flexibacter flexilis
NCBI taxonomy Id: 927664
Other names: F. flexilis DSM 6793, Flexibacter flexilis ATCC 23079, Flexibacter flexilis DSM 6793, Flexibacter flexilis IFO 15060, Flexibacter flexilis str. DSM 6793, Flexibacter flexilis strain DSM 6793
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