STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC38549.1AraC-type DNA-binding protein. (284 aa)    
Predicted Functional Partners:
SFC38523.1
Thiosulfate dehydrogenase [quinone] large subunit.
 
     0.818
SFB76808.1
AraC-type DNA-binding protein.
  
   0.750
SFC41097.1
AraC-type DNA-binding protein.
  
     0.732
SFC38496.1
Polysaccharide deacetylase.
 
     0.706
SFB96626.1
AraC-type DNA-binding protein.
  
     0.700
SFB98045.1
AraC-type DNA-binding protein.
  
     0.698
SFC68760.1
AraC-type DNA-binding protein.
  
     0.678
SFB95080.1
AraC-type DNA-binding protein.
  
     0.659
SFC83725.1
AraC family transcriptional regulator, transcriptional activator of pobA.
  
     0.655
SFB75290.1
AraC-type DNA-binding protein.
  
     0.626
Your Current Organism:
Flexibacter flexilis
NCBI taxonomy Id: 927664
Other names: F. flexilis DSM 6793, Flexibacter flexilis ATCC 23079, Flexibacter flexilis DSM 6793, Flexibacter flexilis IFO 15060, Flexibacter flexilis str. DSM 6793, Flexibacter flexilis strain DSM 6793
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.