STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC49345.1Polyketide cyclase / dehydrase and lipid transport. (150 aa)    
Predicted Functional Partners:
SFC49405.1
DNA-binding transcriptional regulator, MarR family.
 
     0.949
SFC49377.1
EVE domain-containing protein; Belongs to the UPF0310 family.
 
     0.913
SFC25048.1
DNA-binding transcriptional regulator, MarR family.
 
     0.779
SFB76353.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.675
SFB73303.1
Transposase zinc-ribbon domain-containing protein.
  
     0.650
SFC38496.1
Polysaccharide deacetylase.
  
     0.499
SFC49322.1
Putative endopeptidase.
       0.439
SFB85796.1
Helix-turn-helix.
  
     0.412
SFB95056.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
  
     0.407
Your Current Organism:
Flexibacter flexilis
NCBI taxonomy Id: 927664
Other names: F. flexilis DSM 6793, Flexibacter flexilis ATCC 23079, Flexibacter flexilis DSM 6793, Flexibacter flexilis IFO 15060, Flexibacter flexilis str. DSM 6793, Flexibacter flexilis strain DSM 6793
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.