STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC59271.1ABC transporter. (209 aa)    
Predicted Functional Partners:
SFC74473.1
ABC-2 type transport system permease protein.
  
 0.894
SFC05112.1
Heme exporter protein B.
 
  
  0.771
atpD
F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.740
atpA
F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.734
SFC61895.1
ATP-binding cassette, subfamily B.
  
 
  0.727
SFC42519.1
Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
 
     0.694
SFC93894.1
iron(III) transport system ATP-binding protein/NitT/TauT family transport system ATP-binding protein/putative spermidine/putrescine transport system ATP-binding protein.
  
  
  0.686
SFC42460.1
Heme exporter protein C.
 
  
  0.649
SFC14451.1
CarboxypepD_reg-like domain-containing protein.
  
     0.621
SFC01986.1
ABC-type multidrug transport system, ATPase and permease component.
  
 
  0.616
Your Current Organism:
Flexibacter flexilis
NCBI taxonomy Id: 927664
Other names: F. flexilis DSM 6793, Flexibacter flexilis ATCC 23079, Flexibacter flexilis DSM 6793, Flexibacter flexilis IFO 15060, Flexibacter flexilis str. DSM 6793, Flexibacter flexilis strain DSM 6793
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.