STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC70262.1ATP-binding cassette, subfamily B, MsbA. (615 aa)    
Predicted Functional Partners:
SFB71034.1
ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain.
   
 
0.928
SFB77283.1
Putative ABC transport system ATP-binding protein.
 
    
0.900
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
    
0.811
SFB95178.1
ATPase family associated with various cellular activities (AAA).
   
 0.792
SFC87177.1
iron(III) transport system ATP-binding protein.
 
    
0.739
SFC06635.1
Putative ABC transport system ATP-binding protein.
 
    
0.726
SFC42727.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
  
   0.682
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
  
  0.650
SFC16253.1
Putative intracellular protease/amidase.
   
  0.604
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.603
Your Current Organism:
Flexibacter flexilis
NCBI taxonomy Id: 927664
Other names: F. flexilis DSM 6793, Flexibacter flexilis ATCC 23079, Flexibacter flexilis DSM 6793, Flexibacter flexilis IFO 15060, Flexibacter flexilis str. DSM 6793, Flexibacter flexilis strain DSM 6793
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.